Pseudomonas aeruginosa LESB58, PALES_16561 (hasE)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00529
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015031 protein transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01843
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01843
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Protein secretion/export apparatus Other LESB58 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.10.287.1490 - - - 146 297 1.8E-5
Coils Coil Coil - - 262 296 -
PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature - - 422 442 1.2E-65
SUPERFAMILY SSF111369 HlyD-like secretion proteins - - 266 346 4.71E-5
Gene3D G3DSA:2.40.30.170 - - - 305 425 2.5E-6
PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature - - 33 56 1.2E-65
PANTHER PTHR30386 MEMBRANE FUSION SUBUNIT OF EMRAB-TOLC MULTIDRUG EFFLUX PUMP - - 20 437 3.1E-75
NCBIfam TIGR01843 JCVI: HlyD family type I secretion periplasmic adaptor subunit IPR010129 Type I secretion membrane fusion protein, HlyD family 22 443 0.0
PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature - - 407 422 1.2E-65
Pfam PF00529 Cation efflux system protein CusB domain 1 IPR043602 Cation efflux system protein CusB, domain 1 35 399 8.7E-19
PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature - - 75 95 1.2E-65
PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature - - 307 328 1.2E-65
Gene3D G3DSA:2.40.50.100 - - - 67 126 8.3E-8
PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature - - 340 364 1.2E-65
Coils Coil Coil - - 174 208 -
PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature - - 364 387 1.2E-65

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.