Pseudomonas aeruginosa LESB58, PALES_16571

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0015562 efflux transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01844
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0019867 outer membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01844
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01844
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Protein secretion/export apparatus Other LESB58 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF02321 Outer membrane efflux protein IPR003423 Outer membrane efflux protein 24 212 2.8E-19
Gene3D G3DSA:1.20.1600.10 Outer membrane efflux proteins (OEP) - - 24 439 5.0E-73
Pfam PF02321 Outer membrane efflux protein IPR003423 Outer membrane efflux protein 239 423 1.2E-28
FunFam G3DSA:1.20.1600.10:FF:000014 Alkaline protease secretion protein AprF - - 24 440 0.0
SUPERFAMILY SSF56954 Outer membrane efflux proteins (OEP) - - 22 437 3.4E-79
NCBIfam TIGR01844 JCVI: TolC family outer membrane protein IPR010130 Type I secretion outer membrane protein, TolC 20 437 8.7E-113
PANTHER PTHR30026 OUTER MEMBRANE PROTEIN TOLC - - 6 436 5.1E-85

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.