Pseudomonas aeruginosa LESB58, PALES_16671 (nosD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Energy metabolism Other LESB58 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00710 pbh1 IPR006626 Parallel beta-helix repeat 189 210 3300.0
PANTHER PTHR22990 F-BOX ONLY PROTEIN - - 105 339 2.4E-9
SMART SM00710 pbh1 IPR006626 Parallel beta-helix repeat 315 353 4000.0
SMART SM00710 pbh1 IPR006626 Parallel beta-helix repeat 211 232 3900.0
SUPERFAMILY SSF51126 Pectin lyase-like IPR011050 Pectin lyase fold/virulence factor 37 407 1.08E-56
SMART SM00710 pbh1 IPR006626 Parallel beta-helix repeat 292 313 400.0
SMART SM00722 complete IPR006633 Carbohydrate-binding/sugar hydrolysis domain 38 187 2.5E-24
SMART SM00710 pbh1 IPR006626 Parallel beta-helix repeat 85 113 31.0
NCBIfam TIGR04247 JCVI: nitrous oxide reductase family maturation protein NosD IPR026464 Nitrous oxide reductase family maturation protein NosD 41 420 0.0
Gene3D G3DSA:2.160.20.10 - IPR012334 Pectin lyase fold 212 355 6.9E-8
SMART SM00710 pbh1 IPR006626 Parallel beta-helix repeat 167 188 1.5
SMART SM00722 complete IPR006633 Carbohydrate-binding/sugar hydrolysis domain 193 367 6.7E-30
Gene3D G3DSA:2.160.20.10 - IPR012334 Pectin lyase fold 69 208 1.7E-15
NCBIfam TIGR03804 JCVI: parallel beta-helix repeat (two copies) IPR022441 Parallel beta-helix repeat-2 288 329 5.6E-5
SMART SM00710 pbh1 IPR006626 Parallel beta-helix repeat 233 255 340.0
SMART SM00710 pbh1 IPR006626 Parallel beta-helix repeat 115 136 31.0
Pfam PF05048 Periplasmic copper-binding protein (NosD) IPR007742 Periplasmic copper-binding protein NosD, beta helix domain 144 356 2.7E-55
SMART SM00710 pbh1 IPR006626 Parallel beta-helix repeat 137 166 1000.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.