Pseudomonas aeruginosa LESB58, PALES_35491 (nirD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0051537 2 iron, 2 sulfur cluster binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50022
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008942 nitrite reductase [NAD(P)H] activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF13806
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Central intermediary metabolism Other LESB58 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Nitrogen metabolism ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR02378 JCVI: nitrite reductase small subunit NirD IPR012748 Rieske-like [2Fe-2S] domain, NirD-type 2 99 6.1E-32
Pfam PF13806 Rieske-like [2Fe-2S] domain IPR012748 Rieske-like [2Fe-2S] domain, NirD-type 2 98 3.6E-15
CDD cd03530 Rieske_NirD_small_Bacillus - - 3 100 1.48177E-56
SUPERFAMILY SSF50022 ISP domain IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily 1 103 1.7E-34
Gene3D G3DSA:2.102.10.10 - IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily 1 100 2.4E-27
FunFam G3DSA:2.102.10.10:FF:000013 Nitrite reductase [NAD(P)H], small subunit - - 1 100 1.1E-42
PANTHER PTHR21496 FERREDOXIN-RELATED - - 2 104 2.0E-17

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.