Pseudomonas aeruginosa LESB58, PALES_50041

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000018
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016614 oxidoreductase activity, acting on CH-OH group of donors
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000018
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005506 iron ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000018
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0009055 electron transfer activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00605
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0020037 heme binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000018
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Putative enzymes Other LESB58 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.10.760.10 - IPR036909 Cytochrome c-like domain superfamily 283 414 2.3E-22
SUPERFAMILY SSF46626 Cytochrome c IPR036909 Cytochrome c-like domain superfamily 176 289 1.41E-14
PRINTS PR00605 Class IC cytochrome C signature IPR008168 Cytochrome c, class IC 361 383 1.3E-5
SUPERFAMILY SSF46626 Cytochrome c IPR036909 Cytochrome c-like domain superfamily 300 404 3.4E-20
Gene3D G3DSA:1.10.760.10 - IPR036909 Cytochrome c-like domain superfamily 4 136 7.7E-9
PANTHER PTHR35008:SF8 BLL4482 PROTEIN - - 1 411 0.0
PRINTS PR00605 Class IC cytochrome C signature IPR008168 Cytochrome c, class IC 308 319 1.3E-5
Pfam PF00034 Cytochrome c IPR009056 Cytochrome c-like domain 30 129 3.1E-6
PANTHER PTHR35008 BLL4482 PROTEIN-RELATED - - 1 411 0.0
Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III IPR009056 Cytochrome c-like domain 300 383 1.6E-9
SUPERFAMILY SSF46626 Cytochrome c IPR036909 Cytochrome c-like domain superfamily 17 152 3.81E-22
PIRSF PIRSF000018 Mb_ADH_cytochrome_c IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit 1 415 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.