Pseudomonas aeruginosa LESB58, PALES_50101

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Secreted Factors (toxins, enzymes, alginate) Other LESB58 genes in this class
Cell wall / LPS / capsule Other LESB58 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF18676 MBG domain (YGX type) IPR041286 MBG domain, YGX type 1235 1310 3.4E-20
PANTHER PTHR12338:SF8 ANTIGEN 43 - - 1385 1701 0.0
PANTHER PTHR12338 AUTOTRANSPORTER - - 1385 1701 0.0
Pfam PF18676 MBG domain (YGX type) IPR041286 MBG domain, YGX type 1881 1955 3.6E-19
Gene3D G3DSA:3.30.160.710 - - - 1050 1121 3.7E-6
Pfam PF18676 MBG domain (YGX type) IPR041286 MBG domain, YGX type 912 985 7.8E-20
PANTHER PTHR12338 AUTOTRANSPORTER - - 2 985 0.0
Pfam PF18676 MBG domain (YGX type) IPR041286 MBG domain, YGX type 1397 1472 3.4E-20
PANTHER PTHR12338:SF8 ANTIGEN 43 - - 1858 2155 0.0
PANTHER PTHR12338 AUTOTRANSPORTER - - 1858 2155 0.0
Pfam PF18676 MBG domain (YGX type) IPR041286 MBG domain, YGX type 1800 1875 2.8E-20
PANTHER PTHR12338:SF8 ANTIGEN 43 - - 2 985 0.0
PANTHER PTHR12338 AUTOTRANSPORTER - - 980 1250 0.0
Pfam PF18676 MBG domain (YGX type) IPR041286 MBG domain, YGX type 1639 1713 1.5E-19
SUPERFAMILY SSF51126 Pectin lyase-like IPR011050 Pectin lyase fold/virulence factor 63 336 1.88E-43
Gene3D G3DSA:3.30.160.710 - - - 1616 1682 2.7E-5
Pfam PF18676 MBG domain (YGX type) IPR041286 MBG domain, YGX type 1478 1552 1.5E-19
Gene3D G3DSA:3.30.160.710 - - - 1455 1521 2.7E-5
Pfam PF18676 MBG domain (YGX type) IPR041286 MBG domain, YGX type 1961 2034 4.3E-16
Gene3D G3DSA:3.30.160.710 - - - 1696 1773 5.7E-5
Gene3D G3DSA:3.30.160.710 - - - 1212 1290 5.5E-5
Gene3D G3DSA:3.30.160.710 - - - 1293 1365 2.7E-5
Pfam PF18676 MBG domain (YGX type) IPR041286 MBG domain, YGX type 1154 1229 1.5E-20
Pfam PF18676 MBG domain (YGX type) IPR041286 MBG domain, YGX type 1719 1794 1.5E-20
Gene3D G3DSA:2.160.20.10 - IPR012334 Pectin lyase fold 42 426 6.8E-89
Pfam PF18676 MBG domain (YGX type) IPR041286 MBG domain, YGX type 824 906 8.1E-12
Gene3D G3DSA:3.30.160.710 - - - 1131 1203 3.2E-5
PANTHER PTHR12338:SF8 ANTIGEN 43 - - 980 1250 0.0
PANTHER PTHR12338:SF8 ANTIGEN 43 - - 1705 1896 0.0
Gene3D G3DSA:3.30.160.710 - - - 796 886 5.1E-7
Pfam PF18676 MBG domain (YGX type) IPR041286 MBG domain, YGX type 1073 1148 1.1E-20
Pfam PF18676 MBG domain (YGX type) IPR041286 MBG domain, YGX type 992 1067 1.9E-19
PANTHER PTHR12338:SF8 ANTIGEN 43 - - 1223 1540 0.0
PANTHER PTHR12338 AUTOTRANSPORTER - - 1223 1540 0.0
Pfam PF18676 MBG domain (YGX type) IPR041286 MBG domain, YGX type 1316 1391 1.5E-20
Gene3D G3DSA:3.30.160.710 - - - 893 954 3.7E-5
Gene3D G3DSA:3.30.160.710 - - - 1374 1452 5.5E-5
PANTHER PTHR12338 AUTOTRANSPORTER - - 1705 1896 0.0
Pfam PF05860 TPS secretion domain IPR008638 Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain 40 303 2.7E-44
Pfam PF18676 MBG domain (YGX type) IPR041286 MBG domain, YGX type 1558 1633 3.4E-20
SMART SM00912 Haemagg_act_2a IPR008638 Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain 40 152 1.2E-35
Gene3D G3DSA:3.30.160.710 - - - 1535 1613 5.5E-5
TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain IPR008638 Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain 74 149 6.7E-19

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.