Pseudomonas aeruginosa LESB58, PALES_58371

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08447
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Membrane proteins Other LESB58 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00091 pas_2 IPR000014 PAS domain 401 467 2.6E-8
CDD cd00130 PAS IPR000014 PAS domain 410 512 1.84339E-11
SMART SM00091 pas_2 IPR000014 PAS domain 277 343 23.0
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 320 395 2.09E-14
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 398 522 2.2E-19
CDD cd01949 GGDEF IPR000160 GGDEF domain 527 685 8.22208E-53
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 527 682 1.4E-40
SMART SM00052 duf2_2 IPR001633 EAL domain 697 942 6.1E-120
PANTHER PTHR44757 DIGUANYLATE CYCLASE DGCP - - 378 944 0.0
CDD cd00130 PAS IPR000014 PAS domain 320 390 1.06479E-5
SMART SM00086 pac_2 IPR001610 PAC motif 350 393 1.0E-6
Pfam PF00563 EAL domain IPR001633 EAL domain 704 937 8.1E-73
CDD cd01948 EAL IPR001633 EAL domain 703 942 6.3619E-103
Pfam PF08447 PAS fold IPR013655 PAS fold-3 317 386 5.3E-17
Coils Coil Coil - - 691 711 -
Gene3D G3DSA:3.30.450.20 PAS domain - - 396 532 2.9E-32
FunFam G3DSA:3.20.20.450:FF:000001 Cyclic di-GMP phosphodiesterase yahA - - 698 951 2.4E-95
NCBIfam TIGR00254 JCVI: diguanylate cyclase (GGDEF) domain IPR000160 GGDEF domain 527 685 2.8E-32
Pfam PF13426 PAS domain IPR000014 PAS domain 412 513 6.6E-16
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 324 399 1.8E-7
SUPERFAMILY SSF141868 EAL domain-like IPR035919 EAL domain superfamily 702 949 1.57E-91
Gene3D G3DSA:3.30.70.270 - IPR043128 Reverse transcriptase/Diguanylate cyclase domain 533 696 1.5E-49
Gene3D G3DSA:3.20.20.450 EAL domain IPR035919 EAL domain superfamily 697 951 3.9E-102
SUPERFAMILY SSF55073 Nucleotide cyclase IPR029787 Nucleotide cyclase 531 689 6.75E-42
SMART SM00267 duf1_3 IPR000160 GGDEF domain 515 687 4.8E-51
Coils Coil Coil - - 212 264 -
SMART SM00086 pac_2 IPR001610 PAC motif 473 515 0.0021
Gene3D G3DSA:3.30.450.20 PAS domain - - 269 389 3.3E-29
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 392 512 4.54E-24

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.