Pseudomonas aeruginosa LESB58, PALES_58471 (wbpW)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016779 nucleotidyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01050
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009058 biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00483
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000271 polysaccharide biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01479
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0005976 polysaccharide metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01050
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Cell wall / LPS / capsule Other LESB58 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Lipopolysaccharide biosynthesis ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd02213 cupin_PMI_typeII_C - - 344 471 1.40211E-67
SUPERFAMILY SSF53448 Nucleotide-diphospho-sugar transferases IPR029044 Nucleotide-diphospho-sugar transferases 2 286 4.16E-65
Gene3D G3DSA:2.60.120.10 Jelly Rolls IPR014710 RmlC-like jelly roll fold 355 461 1.4E-16
NCBIfam TIGR01479 JCVI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 2 477 0.0
FunFam G3DSA:3.90.550.10:FF:000046 Mannose-1-phosphate guanylyltransferase (GDP) - - 2 358 5.1E-126
PANTHER PTHR46390 MANNOSE-1-PHOSPHATE GUANYLYLTRANSFERASE - - 2 472 0.0
FunFam G3DSA:2.60.120.10:FF:000032 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase - - 355 472 4.0E-54
Pfam PF01050 Mannose-6-phosphate isomerase IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal 323 473 2.1E-67
CDD cd02509 GDP-M1P_Guanylyltransferase - - 2 285 4.64494E-119
SUPERFAMILY SSF51182 RmlC-like cupins IPR011051 RmlC-like cupin domain superfamily 189 477 4.12E-77
Gene3D G3DSA:3.90.550.10 Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A IPR029044 Nucleotide-diphospho-sugar transferases 2 354 1.7E-114
Coils Coil Coil - - 345 365 -
Pfam PF00483 Nucleotidyl transferase IPR005835 Nucleotidyl transferase domain 4 289 1.5E-51

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.