Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
SUPERFAMILY | SSF53850 | Periplasmic binding protein-like II | - | - | 91 | 294 | 3.02E-45 |
Pfam | PF03466 | LysR substrate binding domain | IPR005119 | LysR, substrate-binding | 89 | 293 | 6.8E-53 |
CDD | cd08419 | PBP2_CbbR_RubisCO_like | - | - | 94 | 290 | 1.52008E-98 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 41 | 52 | 8.8E-8 |
PANTHER | PTHR30126 | HTH-TYPE TRANSCRIPTIONAL REGULATOR | - | - | 1 | 295 | 2.7E-76 |
Pfam | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family | IPR000847 | Transcription regulator HTH, LysR | 5 | 64 | 7.5E-20 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 20 | 31 | 8.8E-8 |
Gene3D | G3DSA:3.40.190.290 | - | - | - | 95 | 300 | 2.8E-41 |
SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | IPR036390 | Winged helix DNA-binding domain superfamily | 1 | 80 | 1.85E-20 |
Gene3D | G3DSA:1.10.10.10 | - | IPR036388 | Winged helix-like DNA-binding domain superfamily | 2 | 87 | 8.8E-23 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 31 | 41 | 8.8E-8 |