Pseudomonas aeruginosa 2192, PA2G_04955

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016887 ATPase activity
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA4997
 ECO:0000249
sequence similarity evidence used in automatic assertion		 17644517
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00211
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00211
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0034040 ATPase-coupled lipid transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS51239
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50929
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016021 integral component of membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.20.1560.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0042626 ATPase-coupled transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS50929
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Fatty acid and phospholipid metabolism Other 2192 genes in this class
Transport of small molecules Other 2192 genes in this class
Cell wall / LPS / capsule Other 2192 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
ProSitePatterns PS00211 ABC transporters family signature. IPR017871 ABC transporter, conserved site 495 509 -
ProSiteProfiles PS50893 ATP-binding cassette, ABC transporter-type domain profile. IPR003439 ABC transporter-like 356 592 24.45
ProSiteProfiles PS50929 ABC transporter integral membrane type-1 fused domain profile. IPR011527 ABC transporter type 1, transmembrane domain 31 324 51.971
CDD cd03251 ABCC_MsbA 356 590 4.00411E-135
SUPERFAMILY SSF52540 IPR027417 P-loop containing nucleoside triphosphate hydrolase 347 591 1.44E-94
CDD cd18552 ABC_6TM_MsbA_like 30 332 2.66393E-106
ProSiteProfiles PS51239 Lipid A export ATP-binding/permease protein msbA family profile. IPR011917 ABC transporter, lipid A export, MsbA 11 594 133.822
SUPERFAMILY SSF90123 IPR036640 ABC transporter type 1, transmembrane domain superfamily 18 338 9.16E-72
Pfam PF00664 ABC transporter transmembrane region IPR011527 ABC transporter type 1, transmembrane domain 31 306 2.9E-49
Pfam PF00005 ABC transporter IPR003439 ABC transporter-like 373 523 2.3E-32
Gene3D G3DSA:3.40.50.300 340 593 2.3E-94
SMART SM00382 IPR003593 AAA+ ATPase domain 382 575 4.6E-17
Gene3D G3DSA:1.20.1560.10 IPR036640 ABC transporter type 1, transmembrane domain superfamily 16 339 1.5E-75
TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA IPR011917 ABC transporter, lipid A export, MsbA 15 595 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.