Pseudomonas aeruginosa 2192, PA2G_05963

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF14659
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006310 DNA recombination
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.443.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015074 DNA integration
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF14659
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF14659 Phage integrase, N-terminal SAM-like domain IPR004107 Integrase, SAM-like, N-terminal 83 138 2.6E-7
SUPERFAMILY SSF56349 DNA breaking-rejoining enzymes IPR011010 DNA breaking-rejoining enzyme, catalytic core 82 364 2.03E-53
PANTHER PTHR30629 PROPHAGE INTEGRASE - - 43 362 6.3E-20
CDD cd01189 INT_ICEBs1_C_like - - 191 360 4.27397E-39
Pfam PF00589 Phage integrase family IPR002104 Integrase, catalytic domain 191 359 4.8E-17
Gene3D G3DSA:1.10.443.10 Intergrase catalytic core IPR013762 Integrase-like, catalytic domain superfamily 183 377 3.1E-35
Pfam PF12167 Arm DNA-binding domain IPR022000 Min27-like integrase, DNA-binding domain 6 68 2.6E-21
Gene3D G3DSA:1.10.150.130 - IPR010998 Integrase/recombinase, N-terminal 77 182 5.2E-21

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.