Pseudomonas aeruginosa 2192, PA2G_05970

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF47413
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.10.260.40 - IPR010982 Lambda repressor-like, DNA-binding domain superfamily 19 109 3.0E-33
Pfam PF01381 Helix-turn-helix IPR001387 Cro/C1-type helix-turn-helix domain 42 90 3.4E-11
SUPERFAMILY SSF51306 LexA/Signal peptidase IPR036286 LexA/Signal peptidase-like superfamily 135 259 1.1E-20
Gene3D G3DSA:2.10.109.10 Umud Fragment, subunit A - - 132 263 8.2E-31
Pfam PF00717 Peptidase S24-like IPR015927 Peptidase S24/S26A/S26B/S26C 137 258 4.3E-20
CDD cd00093 HTH_XRE IPR001387 Cro/C1-type helix-turn-helix domain 41 94 1.62291E-11
PANTHER PTHR40661 - - - 43 259 1.9E-11
SMART SM00530 mbf_short4 IPR001387 Cro/C1-type helix-turn-helix domain 39 94 8.1E-11
SUPERFAMILY SSF47413 lambda repressor-like DNA-binding domains IPR010982 Lambda repressor-like, DNA-binding domain superfamily 20 110 5.07E-23
CDD cd06529 S24_LexA-like IPR039418 LexA-like 197 258 9.93239E-10

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.