Pseudomonas aeruginosa PACS2, A0K_RS21145

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Energy metabolism Other PACS2 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00710 pbh1 IPR006626 Parallel beta-helix repeat 115 136 31.0
Gene3D G3DSA:2.160.20.10 - IPR012334 Pectin lyase fold 72 225 2.1E-17
SMART SM00710 pbh1 IPR006626 Parallel beta-helix repeat 233 255 340.0
Pfam PF05048 Periplasmic copper-binding protein (NosD) IPR007742 Periplasmic copper-binding protein NosD, beta helix domain 144 356 1.5E-55
NCBIfam TIGR04247 JCVI: nitrous oxide reductase family maturation protein NosD IPR026464 Nitrous oxide reductase family maturation protein NosD 41 420 0.0
Gene3D G3DSA:2.160.20.10 - IPR012334 Pectin lyase fold 226 352 8.1E-8
SUPERFAMILY SSF51126 Pectin lyase-like IPR011050 Pectin lyase fold/virulence factor 37 407 5.94E-58
SMART SM00710 pbh1 IPR006626 Parallel beta-helix repeat 211 232 3900.0
SMART SM00710 pbh1 IPR006626 Parallel beta-helix repeat 137 166 1000.0
SMART SM00710 pbh1 IPR006626 Parallel beta-helix repeat 292 313 400.0
SMART SM00710 pbh1 IPR006626 Parallel beta-helix repeat 167 188 1.5
PANTHER PTHR22990 F-BOX ONLY PROTEIN - - 103 338 6.0E-10
SMART SM00722 complete IPR006633 Carbohydrate-binding/sugar hydrolysis domain 193 367 1.6E-29
SMART SM00710 pbh1 IPR006626 Parallel beta-helix repeat 85 113 16.0
SMART SM00722 complete IPR006633 Carbohydrate-binding/sugar hydrolysis domain 38 187 4.1E-24
NCBIfam TIGR03804 JCVI: parallel beta-helix repeat (two copies) IPR022441 Parallel beta-helix repeat-2 288 329 5.6E-5
SMART SM00710 pbh1 IPR006626 Parallel beta-helix repeat 315 353 4000.0
SMART SM00710 pbh1 IPR006626 Parallel beta-helix repeat 189 210 1500.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.