Pseudomonas aeruginosa PACS2, A0K_RS27345

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00065
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other PACS2 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00563 EAL domain IPR001633 EAL domain 645 880 1.7E-77
SMART SM00091 IPR000014 PAS domain 24 87 59.0
SUPERFAMILY SSF55781 195 335 3.05E-19
CDD cd00130 PAS IPR000014 PAS domain 355 457 3.64951E-11
Gene3D G3DSA:3.20.20.450 IPR035919 EAL domain superfamily 642 891 3.5E-104
CDD cd01949 GGDEF IPR000160 GGDEF domain 472 627 5.79585E-55
CDD cd01948 EAL IPR001633 EAL domain 645 884 2.26058E-102
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 471 624 1.6E-39
SUPERFAMILY SSF55785 IPR035965 PAS domain superfamily 352 458 3.22E-22
TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain IPR000160 GGDEF domain 467 628 2.2E-35
TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein IPR000014 PAS domain 346 466 1.1E-17
SUPERFAMILY SSF141868 IPR035919 EAL domain superfamily 644 892 3.66E-91
ProSiteProfiles PS50113 PAC domain profile. IPR000700 PAS-associated, C-terminal 417 469 13.697
SMART SM00086 IPR001610 PAC motif 418 460 8.1E-7
ProSiteProfiles PS50883 EAL domain profile. IPR001633 EAL domain 640 894 81.218
SMART SM00052 IPR001633 EAL domain 639 885 2.4E-121
Gene3D G3DSA:3.30.450.20 344 469 2.2E-28
Gene3D G3DSA:3.30.70.270 470 641 3.0E-51
ProSiteProfiles PS50887 GGDEF domain profile. IPR000160 GGDEF domain 499 631 31.096
Pfam PF01590 GAF domain IPR003018 GAF domain 193 332 7.5E-13
Pfam PF13426 PAS domain IPR000014 PAS domain 358 459 7.6E-15
SMART SM00267 IPR000160 GGDEF domain 460 629 1.7E-56
Gene3D G3DSA:3.30.450.40 IPR029016 GAF-like domain superfamily 166 342 1.9E-19
ProSiteProfiles PS50112 PAS repeat profile. IPR000014 PAS domain 344 414 11.327
SMART SM00091 IPR000014 PAS domain 346 412 3.8E-6
SMART SM00065 IPR003018 GAF domain 192 343 5.2E-9
SUPERFAMILY SSF55073 IPR029787 Nucleotide cyclase 476 630 1.1E-43

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.