Pseudomonas aeruginosa PACS2, A0K_RS27355

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0070475 rRNA base methylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00934
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008649 rRNA methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00934
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008757 S-adenosylmethionine-dependent methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.40.50.150
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other PACS2 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR37426 RIBOSOMAL RNA LARGE SUBUNIT METHYLTRANSFERASE J IPR007473 Ribosomal RNA large subunit methyltransferase J 1 278 4.0E-121
SUPERFAMILY SSF53335 S-adenosyl-L-methionine-dependent methyltransferases IPR029063 S-adenosyl-L-methionine-dependent methyltransferase superfamily 8 274 1.33E-89
Gene3D G3DSA:3.40.50.150 Vaccinia Virus protein VP39 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase superfamily 1 278 1.8E-104
Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ IPR007473 Ribosomal RNA large subunit methyltransferase J 32 276 2.2E-114
FunFam G3DSA:3.40.50.150:FF:000037 Ribosomal RNA large subunit methyltransferase J - - 1 278 7.0E-114
Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. IPR007473 Ribosomal RNA large subunit methyltransferase J 1 265 39.858231

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.