Pseudomonas aeruginosa PACS2, A0K_RS29670

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0015920 lipopolysaccharide transport
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA5450
 ECO:0000249
sequence similarity evidence used in automatic assertion		 9244257
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd03220
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0140359 ABC-type transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd03220
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00005
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other PACS2 genes in this class
Cell wall / LPS / capsule Other PACS2 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00005 ABC transporter IPR003439 ABC transporter-like, ATP-binding domain 41 173 2.9E-20
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 50 239 1.6E-14
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 38 237 9.19E-47
CDD cd10147 Wzt_C-like IPR029439 Wzt, C-terminal 259 401 5.82002E-42
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 27 259 1.6E-47
Gene3D G3DSA:2.70.50.60 - - - 260 395 1.0E-31
PANTHER PTHR46743 TEICHOIC ACIDS EXPORT ATP-BINDING PROTEIN TAGH - - 2 406 4.7E-130
Pfam PF14524 Wzt C-terminal domain IPR029439 Wzt, C-terminal 261 398 8.2E-33
CDD cd03220 ABC_KpsT_Wzt IPR015860 ABC transporter, teichoic acids export TagH-like 4 227 1.63817E-100

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.