Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA0428
|
Name |
Synonym: rhlE |
Replicon | chromosome |
Genomic location | 477886 - 479805 (- strand) |
Transposon Mutants | 4 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 2 transposon mutants in orthologs |
RefSeq | NP_249119.1 |
GI | 15595625 |
Affymetrix | PA0428_at |
Entrez | 877822 |
GenBank | AAG03817.1 |
INSDC | AAG03817.1 |
NCBI Locus Tag | PA0428 |
protein_id(GenBank) | gb|AAG03817.1|AE004480_1|gnl|PseudoCAP|PA0428 |
TIGR | NTL03PA00429 |
UniParc | UPI00000C504C |
UniProtKB Acc | Q9I689 |
UniProtKB ID | Q9I689_PSEAE |
UniRef100 | UniRef100_Q9I689 |
UniRef50 | UniRef50_Q4K4H4 |
UniRef90 | UniRef90_Q9I689 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
probable ATP-dependent RNA helicase
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | 29.11 |
Kyte-Doolittle Hydrophobicity Value | -0.819 |
Molecular Weight (kDa) | 70.1 |
Isoelectric Point (pI) | 10.65 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 640 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000419 (525 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA0428
Search term: probable ATP-dependent RNA helicase
|
Ensembl
110, assembly
GRCh38.p14
|
DEAD-box helicase 27 [Source:HGNC Symbol;Acc:HGNC:15837]
E-value:
3.0e-65
Percent Identity:
43.6
|
Structural analysis of the rhlE gene of Escherichia coli.
Ohmori H
Jpn J Genet 1994 Feb;69(1):1-12
PubMed ID: 8037924
|
The protein family of RNA helicases.
Lüking A, Stahl U, Schmidt U
Crit Rev Biochem Mol Biol 1998;33(4):259-96
PubMed ID: 9747670
|
Poly(A) polymerase I of Escherichia coli: characterization of the catalytic domain, an RNA binding site and regions for the interaction with proteins involved in mRNA degradation.
Raynal LC, Carpousis AJ
Mol Microbiol 1999 May;32(4):765-75
PubMed ID: 10361280
|