Pseudomonas aeruginosa PAO1, PA0826.1
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest |
| Locus Tag |
PA0826.1
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 901746 - 901778 (- strand) |
Cross-References
| RefSeq | |
| GI | 308198345 |
| TIGR | NTPA03_tRNA-Pseudo-1 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
translated portion of tmRNA gene ssrA
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -2.02 |
| Kyte-Doolittle Hydrophobicity Value | -0.430 |
| Molecular Weight (kDa) | 1037.0 |
| Isoelectric Point (pI) | 3.49 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold Protein Structure Database
Available for P. aeruginosa PAO1.
Pathogen Association Analysis
| Results |
Pathogenic
Found only in pathogenic strains
Hits to this gene were found in one genus
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG008393 (1 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PA0826.1
Search term: translated portion of tmRNA gene ssrA
|
Human Homologs
References
|
Phylogenetic analysis of tmRNA secondary structure.
Williams KP, Bartel DP
RNA 1996 Dec;2(12):1306-10
PubMed ID: 8972778
|