Pseudomonas aeruginosa PAO1, PA1926

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA1926
Name
Synonym: ycaO
Replicon chromosome
Genomic location 2104177 - 2106447 (+ strand)
Transposon Mutants 3 transposon mutants in PAO1
Transposon Mutants in orthologs 2 transposon mutants in orthologs
CommentTranslation confirmed using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer. Coordinates verified using RT-PCR (PMID:24291602).

Cross-References

RefSeq NP_250616.1
GI 15597122
Affymetrix PA1926_at
Entrez 882130
GenBank AAG05314.1
INSDC AAG05314.1
NCBI Locus Tag PA1926
protein_id(GenBank) gb|AAG05314.1|AE004619_1|gnl|PseudoCAP|PA1926
TIGR NTL03PA01926
UniParc UPI00000C550F
UniProtKB Acc Q9I2H8
UniProtKB ID Q9I2H8_PSEAE
UniRef100 UniRef100_Q9I2H8
UniRef50 UniRef50_V4YTQ3
UniRef90 UniRef90_A0A087L8M0

Product

Feature Type CDS
Coding Frame 1
Product Name
Uncharacterized protein
Product Name Confidence: Class 1
Synonyms conserved hypothetical protein
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -32.58
Kyte-Doolittle Hydrophobicity Value -0.092
Molecular Weight (kDa) 68.1
Isoelectric Point (pI) 4.46

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 91 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001160 (866 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA1926

Human Homologs

References

LTQ-XL mass spectrometry proteome analysis expands the Pseudomonas aeruginosa AmpR regulon to include cyclic di-GMP phosphodiesterases and phosphoproteins, and identifies novel open reading frames.
Kumari H, Murugapiran SK, Balasubramanian D, Schneper L, Merighi M, Sarracino D, Lory S, Mathee K
J Proteomics 2014 Jan;96
PubMed ID: 24291602