Pseudomonas aeruginosa PAO1, PA2613

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA2613
Name
Synonym: ycaJ
Replicon chromosome
Genomic location 2954818 - 2956143 (- strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq NP_251303.1
GI 15597809
Affymetrix PA2613_at
Entrez 882319
GenBank AAG06001.1
INSDC AAG06001.1
NCBI Locus Tag PA2613
protein_id(GenBank) gb|AAG06001.1|AE004690_1|gnl|PseudoCAP|PA2613
TIGR NTL03PA02613
UniParc UPI00000C576A
UniProtKB Acc Q9I0M5
UniProtKB ID Q9I0M5_PSEAE
UniRef100 UniRef100_W0YTM7
UniRef50 UniRef50_P39918
UniRef90 UniRef90_A0A077K064

Product

Feature Type CDS
Coding Frame 1
Product Name
conserved hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -3.90
Kyte-Doolittle Hydrophobicity Value -0.388
Molecular Weight (kDa) 49.0
Isoelectric Point (pI) 6.27

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 646 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002938 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA2613

Human Homologs

Ensembl 110, assembly GRCh38.p14
WRN helicase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:20876]
E-value: 1.1e-79
Percent Identity: 42.3
Ensembl 110, assembly GRCh38.p14
WRN helicase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:20876]
E-value: 1.1e-79
Percent Identity: 42.3
Ensembl 110, assembly GRCh38.p14
WRN helicase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:20876]
E-value: 1.1e-79
Percent Identity: 42.3

References

AAA+: A class of chaperone-like ATPases associated with the assembly, operation, and disassembly of protein complexes.
Neuwald AF, Aravind L, Spouge JL, Koonin EV
Genome Res 1999 Jan;9(1):27-43
PubMed ID: 9927482