Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA2931
|
Name |
cifR
|
Replicon | chromosome |
Genomic location | 3286624 - 3287214 (- strand) |
Transposon Mutants | 3 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 19 transposon mutants in orthologs |
RefSeq | NP_251621.1 |
GI | 15598127 |
Affymetrix | PA2931_at |
DNASU | PaCD00007277 |
Entrez | 878998 |
GenBank | AAG06319.1 |
INSDC | AAG06319.1 |
NCBI Locus Tag | PA2931 |
protein_id(GenBank) | gb|AAG06319.1|AE004719_5|gnl|PseudoCAP|PA2931 |
TIGR | NTL03PA02931 |
UniParc | UPI00000C588E |
UniProtKB Acc | Q9HZR6 |
UniProtKB ID | Q9HZR6_PSEAE |
UniRef100 | UniRef100_Q9HZR6 |
UniRef50 | UniRef50_Q9HZR6 |
UniRef90 | UniRef90_Q9HZR6 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
CifR
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | -1.61 |
Kyte-Doolittle Hydrophobicity Value | -0.189 |
Molecular Weight (kDa) | 21.7 |
Isoelectric Point (pI) | 5.89 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
6NSM | TRANSCRIPTION/DNA | 01/25/19 | TetR family transcriptional regulator CifR C99T-C107S-C181R Cysteines mutant complexed with 26bp double-strand operator DNA | Pseudomonas aeruginosa; SYNTHETIC CONSTRUCT | 2.8 | X-RAY DIFFRACTION | 98.0 |
6NSN | TRANSCRIPTION/DNA | 01/25/19 | TetR family transcriptional regulator CifR C99T-C181R Cysteines mutant complexed with 26bp double-strand operator DNA | Pseudomonas aeruginosa; SYNTHETIC CONSTRUCT | 2.6 | X-RAY DIFFRACTION | 98.5 |
6NSR | TRANSCRIPTION/DNA | 01/25/19 | TetR family transcriptional regulator CifR C99T-C181R cysteine mutant complexed with 26bp double-strand operator DNA and apo-CifR C99T-C181R | Pseudomonas aeruginosa; SYNTHETIC CONSTRUCT | 3 | X-RAY DIFFRACTION | 98.5 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 231 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000241 (6008 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA2931
Search term: cifR
Search term: CifR
|
Cif is negatively regulated by the TetR family repressor CifR.
MacEachran DP, Stanton BA, O'Toole GA
Infect Immun 2008 Jul;76(7):3197-206
PubMed ID: 18458065
|