Pseudomonas aeruginosa PAO1, PA3404

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA3404
Name
Synonym: opmM
Replicon chromosome
Genomic location 3809258 - 3810613 (- strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 3 transposon mutants in orthologs

Cross-References

RefSeq NP_252094.1
GI 15598600
Affymetrix PA3404_at
Entrez 880018
GenBank AAG06792.1
INSDC AAG06792.1
NCBI Locus Tag PA3404
protein_id(GenBank) gb|AAG06792.1|AE004761_8|gnl|PseudoCAP|PA3404
TIGR NTL03PA03404
UniParc UPI00000C59F3
UniProtKB Acc Q9HYK0
UniProtKB ID Q9HYK0_PSEAE
UniRef100 UniRef100_A0A0C6EDD0
UniRef50 UniRef50_Q03027
UniRef90 UniRef90_V6AC83

Product

Feature Type CDS
Coding Frame 1
Product Name
probable outer membrane protein precursor
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Charge (pH 7) 0.44
Kyte-Doolittle Hydrophobicity Value -0.422
Molecular Weight (kDa) 49.9
Isoelectric Point (pI) 7.17

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Outer Membrane Class 2
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 237 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001200 (778 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA3404

Human Homologs

References

Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295
Sequence of a cluster of genes controlling synthesis and secretion of alkaline protease in Pseudomonas aeruginosa: relationships to other secretory pathways.
Duong F, Lazdunski A, Cami B, Murgier M
Gene 1992 Nov 2;121(1):47-54
PubMed ID: 1427098