Pseudomonas aeruginosa PAO1, PA4786

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA4786
Name
Replicon chromosome
Genomic location 5374123 - 5375478 (+ strand)
Transposon Mutants 2 transposon mutants in PAO1

Cross-References

RefSeq NP_253474.1
GI 15599980
Affymetrix PA4786_at
Entrez 880569
GenBank AAG08172.1
INSDC AAG08172.1
NCBI Locus Tag PA4786
protein_id(GenBank) gb|AAG08172.1|AE004892_3|gnl|PseudoCAP|PA4786
TIGR NTL03PA04787
UniParc UPI00000C5E05
UniProtKB Acc Q9HV22
UniProtKB ID Q9HV22_PSEAE
UniRef100 UniRef100_Q9HV22
UniRef50 UniRef50_A0QPE7
UniRef90 UniRef90_W0WKC2

Product

Feature Type CDS
Coding Frame 1
Product Name
probable short-chain dehydrogenase
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) 7.88
Kyte-Doolittle Hydrophobicity Value 0.139
Molecular Weight (kDa) 47.2
Isoelectric Point (pI) 9.88

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Cytoplasmic Class 2
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 652 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004424 (449 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA4786

Human Homologs

References

No references are associated with this feature.