Pseudomonas aeruginosa PAO1, PA5005

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA5005
Name
Replicon chromosome
Genomic location 5623040 - 5624797 (- strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq NP_253692.1
GI 15600198
Affymetrix PA5005_at
Entrez 881615
GenBank AAG08390.1
INSDC AAG08390.1
NCBI Locus Tag PA5005
protein_id(GenBank) gb|AAG08390.1|AE004913_5|gnl|PseudoCAP|PA5005
TIGR NTL03PA05006
UniParc UPI00000C5EC2
UniProtKB Acc Q9HUG0
UniProtKB ID Q9HUG0_PSEAE
UniRef100 UniRef100_Q9HUG0
UniRef50 UniRef50_A1KBI9
UniRef90 UniRef90_Q9HUG0

Product

Feature Type CDS
Coding Frame 1
Product Name
probable carbamoyl transferase
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Detected using LC-MS/MS (66.08 kDa, PMID:21751344)
Charge (pH 7) -0.61
Kyte-Doolittle Hydrophobicity Value -0.328
Molecular Weight (kDa) 66.0
Isoelectric Point (pI) 6.92

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Outer Membrane Vesicle Class 1
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 142 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004612 (552 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA5005

Human Homologs

References

Proteomic analysis of outer membrane vesicles derived from Pseudomonas aeruginosa.
Choi DS, Kim DK, Choi SJ, Lee J, Choi JP, Rho S, Park SH, Kim YK, Hwang D, Gho YS
Proteomics 2011 Aug;11(16):3424-9
PubMed ID: 21751344