Pseudomonas aeruginosa PAO1, PA5008 (wapP)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA5008
Name
wapP
Synonym: waaP
Synonym: waaX
Replicon chromosome
Genomic location 5627131 - 5627865 (- strand)

Cross-References

RefSeq NP_253695.1
GI 15600201
Affymetrix PA5008_at
DNASU PaCD00008161
Entrez 881539
GenBank AAG08393.1
INSDC AAG08393.1
NCBI Locus Tag PA5008
protein_id(GenBank) gb|AAG08393.1|AE004913_8|gnl|PseudoCAP|PA5008
TIGR NTL03PA05009
UniParc UPI00000D4267
UniProtKB Acc G3XD48
UniProtKB ID G3XD48_PSEAE
UniRef100 UniRef100_W0Z176
UniRef50 UniRef50_G8Q3T8
UniRef90 UniRef90_A6VDC7

Product

Feature Type CDS
Coding Frame 1
Product Name
WapP
Product Name Confidence: Class 1
Synonyms hypothetical protein
WaaP
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) 18.35
Kyte-Doolittle Hydrophobicity Value -0.655
Molecular Weight (kDa) 29.1
Isoelectric Point (pI) 10.57

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 12 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004615 (550 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA5008
Search term: wapP
Search term: WapP

Human Homologs

References

Lipopolysaccharide (LPS) inner-core phosphates are required for complete LPS synthesis and transport to the outer membrane in Pseudomonas aeruginosa PAO1.
Delucia AM, Six DA, Caughlan RE, Gee P, Hunt I, Lam JS, Dean CR
MBio 2011 ;2(4):
PubMed ID: 21810964