Pseudomonas aeruginosa PAO1, PA5450 (wzt)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA5450
Name
wzt
Replicon chromosome
Genomic location 6139604 - 6140869 (- strand)
Transposon Mutants 5 transposon mutants in PAO1
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq NP_254137.1
GI 15600643
Affymetrix PA5450_wzt_at
Entrez 883117
GenBank AAG08835.1
INSDC AAG08835.1
NCBI Locus Tag PA5450
protein_id(GenBank) gb|AAG08835.1|AE004958_5|gnl|PseudoCAP|PA5450
TIGR NTL03PA05451
UniParc UPI00000D4269
UniProtKB Acc G3XD58
UniProtKB ID G3XD58_PSEAE
UniRef100 UniRef100_G3XD58
UniRef50 UniRef50_G3XD58
UniRef90 UniRef90_G3XD58

Product

Feature Type CDS
Coding Frame 1
Product Name
ABC subunit of A-band LPS efflux transporter
Product Name Confidence: Class 1
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -5.42
Kyte-Doolittle Hydrophobicity Value -0.174
Molecular Weight (kDa) 47.2
Isoelectric Point (pI) 6.15

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Cytoplasmic Membrane Class 2
Additional evidence for subcellular localization

AlphaFold Protein Structure Database

Available for P. aeruginosa PAO1.

View predicted 3D structure in AlphaFold DB

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001312 (616 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA5450
Search term: wzt

Human Homologs

Ensembl 107, assembly GRCh38.p13
ATP binding cassette subfamily A member 8 [Source:HGNC Symbol;Acc:HGNC:38]
E-value: 7.8e-19
Percent Identity: 27.8
Ensembl 107, assembly GRCh38.p13
ATP binding cassette subfamily A member 8 [Source:HGNC Symbol;Acc:HGNC:38]
E-value: 7.8e-19
Percent Identity: 27.8
Ensembl 107, assembly GRCh38.p13
ATP binding cassette subfamily A member 8 [Source:HGNC Symbol;Acc:HGNC:38]
E-value: 7.8e-19
Percent Identity: 27.8

References

Identification and functional characterization of an ABC transport system involved in polysaccharide export of A-band lipopolysaccharide in Pseudomonas aeruginosa.
Rocchetta HL, Lam JS
J. Bacteriol. 1997 Aug;179(15):4713-24
PubMed ID: 9244257