Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA5454
|
Name |
rmd
|
Replicon | chromosome |
Genomic location | 6144077 - 6144991 (- strand) |
Transposon Mutants | 5 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 2 transposon mutants in orthologs |
RefSeq | NP_254141.1 |
GI | 15600647 |
Affymetrix | PA5454_rmd_at |
Entrez | 883037 |
GenBank | AAG08839.1 |
INSDC | AAG08839.1 |
NCBI Locus Tag | PA5454 |
protein_id(GenBank) | gb|AAG08839.1|AE004958_9|gnl|PseudoCAP|PA5454 |
TIGR | NTL03PA05455 |
UniParc | UPI00000C6013 |
UniProtKB Acc | Q9HTB6 |
UniProtKB ID | RMD_PSEAE |
UniRef100 | UniRef100_Q9HTB6 |
UniRef50 | UniRef50_Q9HTB6 |
UniRef90 | UniRef90_Q9HTB6 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
oxidoreductase Rmd
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | -1.65 |
Kyte-Doolittle Hydrophobicity Value | -0.141 |
Molecular Weight (kDa) | 33.9 |
Isoelectric Point (pI) | 6.68 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
6X3B | OXIDOREDUCTASE | 05/21/20 | Structure of RMD from Pseudomonas aeruginosa complexed with NADPH | Pseudomonas aeruginosa | 1.91 | X-RAY DIFFRACTION | 99.7 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 636 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG005000 (385 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA5454
Search term: rmd
Search term: oxidoreductase Rmd
|
Ensembl
110, assembly
GRCh38.p14
|
GDP-mannose 4,6-dehydratase [Source:HGNC Symbol;Acc:HGNC:4369]
E-value:
5.6e-14
Percent Identity:
27.4
|
Ensembl
110, assembly
GRCh38.p14
|
GDP-mannose 4,6-dehydratase [Source:HGNC Symbol;Acc:HGNC:4369]
E-value:
5.6e-14
Percent Identity:
27.4
|