Pseudomonas aeruginosa PAO1, PA5468

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA5468
Name
Replicon chromosome
Genomic location 6156854 - 6158158 (+ strand)
Transposon Mutants 3 transposon mutants in PAO1
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq NP_254155.1
GI 15600661
Affymetrix PA5468_at
Entrez 879438
GenBank AAG08853.1
INSDC AAG08853.1
NCBI Locus Tag PA5468
protein_id(GenBank) gb|AAG08853.1|AE004959_9|gnl|PseudoCAP|PA5468
TIGR NTL03PA05469
UniParc UPI00000C6021
UniProtKB Acc Q9HTA2
UniProtKB ID Q9HTA2_PSEAE
UniRef100 UniRef100_W0Z3T1
UniRef50 UniRef50_E1PKM6
UniRef90 UniRef90_M4X773

Product

Feature Type CDS
Coding Frame 1
Product Name
probable citrate transporter
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Charge (pH 7) 3.31
Kyte-Doolittle Hydrophobicity Value 0.998
Molecular Weight (kDa) 46.4
Isoelectric Point (pI) 8.30

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 81 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005011 (515 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA5468

Human Homologs

References

Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295