Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA5560
|
Name |
atpB
Synonym: papD Synonym: uncB |
Replicon | chromosome |
Genomic location | 6253542 - 6254411 (- strand) |
Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
RefSeq | NP_254247.1 |
GI | 15600753 |
Affymetrix | PA5560_atpB_at |
DNASU | PaCD00007318 |
Entrez | 880089 |
GenBank | AAG08945.1 |
INSDC | AAG08945.1 |
NCBI Locus Tag | PA5560 |
protein_id(GenBank) | gb|AAG08945.1|AE004967_16|gnl|PseudoCAP|PA5560 |
TIGR | NTL03PA05561 |
UniParc | UPI00000D42A1 |
UniProtKB Acc | Q9HT14 |
UniProtKB ID | ATP6_PSEAE |
UniRef100 | UniRef100_A6VF38 |
UniRef50 | UniRef50_Q329S7 |
UniRef90 | UniRef90_A6VF38 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
ATP synthase A chain
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Detected using LC-MS/MS (31.92 kDa, PMID:21751344)
|
Charge (pH 7) | -2.61 |
Kyte-Doolittle Hydrophobicity Value | 0.828 |
Molecular Weight (kDa) | 31.9 |
Isoelectric Point (pI) | 6.51 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 497 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG005091 (535 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA5560
Search term: atpB
Search term: ATP synthase A chain
|
Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295
|
The nucleotide sequence of the atp genes coding for the F0 subunits a, b, c and the F1 subunit delta of the membrane bound ATP synthase of Escherichia coli.
Nielsen J, Hansen FG, Hoppe J, Friedl P, von Meyenburg K
Mol Gen Genet 1981;184(1):33-9
PubMed ID: 6278247
|
A topological analysis of subunit alpha from Escherichia coli F1F0-ATP synthase predicts eight transmembrane segments.
Lewis MJ, Chang JA, Simoni RD
J Biol Chem 1990 Jun 25;265(18):10541-50
PubMed ID: 2162353
|
Proteomic analysis of outer membrane vesicles derived from Pseudomonas aeruginosa.
Choi DS, Kim DK, Choi SJ, Lee J, Choi JP, Rho S, Park SH, Kim YK, Hwang D, Gho YS
Proteomics 2011 Aug;11(16):3424-9
PubMed ID: 21751344
|