Pseudomonas fluorescens Pf0-1, Pfl01_0004 (gyrB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest
Locus Tag
Pfl01_0004
Name
gyrB
Replicon chromosome
Genomic location 4355 - 6772 (+ strand)

Cross-References

RefSeq YP_345737.1
GI 77456232
EC Number 5.99.1.3
Entrez 3717572
INSDC ABA71748.1
NCBI Locus Tag Pfl01_0004
UniParc UPI00005C7955
UniProtKB Acc Q3KKF8
UniProtKB ID Q3KKF8_PSEPF
UniRef100 UniRef100_A0A0C2A4C5
UniRef50 UniRef50_P13364
UniRef90 UniRef90_Q4KKS7

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA gyrase subunit B
Synonyms
Evidence for Translation
Charge (pH 7) -17.24
Kyte-Doolittle Hydrophobicity Value -0.377
Molecular Weight (kDa) 90.1
Isoelectric Point (pI) 5.51

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000004 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pfl01_0004
Search term: gyrB

Human Homologs

Ensembl 110, assembly GRCh38.p14
DNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]
E-value: 1.3e-30
Percent Identity: 24.9

References

No references are associated with this feature.