Pseudomonas fluorescens Pf0-1, Pfl01_0022
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest |
| Locus Tag |
Pfl01_0022
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 24161 - 25075 (+ strand) |
Cross-References
| RefSeq | YP_345755.1 |
| GI | 77456250 |
| EC Number | 1.3.3.3 |
| Entrez | 3717641 |
| NCBI Locus Tag | Pfl01_0022 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
coproporphyrinogen III oxidase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -7.47 |
| Kyte-Doolittle Hydrophobicity Value | -0.499 |
| Molecular Weight (kDa) | 34645.4 |
| Isoelectric Point (pI) | 5.78 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000024 (537 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: Pfl01_0022
Search term: coproporphyrinogen III oxidase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
coproporphyrinogen oxidase [Source:HGNC Symbol;Acc:HGNC:2321]
E-value:
1.8e-76
Percent Identity:
46.4
|
References
No references are associated with this feature.