Pseudomonas fluorescens Pf0-1, Pfl01_0104 (trpA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest
Locus Tag
Pfl01_0104
Name
trpA
Replicon chromosome
Genomic location 106958 - 107770 (+ strand)

Cross-References

RefSeq YP_345837.1
GI 77456332
EC Number 4.2.1.20
Entrez 3717803
INSDC ABA71848.1
NCBI Locus Tag Pfl01_0104
UniParc UPI00003C7B68
UniProtKB Acc Q3KK58
UniProtKB ID TRPA_PSEPF
UniRef100 UniRef100_Q3KK58
UniRef50 UniRef50_P07344
UniRef90 UniRef90_Q4KKP5

Product

Feature Type CDS
Coding Frame 1
Product Name
tryptophan synthase subunit alpha
Synonyms
Evidence for Translation
Charge (pH 7) -6.86
Kyte-Doolittle Hydrophobicity Value 0.051
Molecular Weight (kDa) 28649.4
Isoelectric Point (pI) 4.98

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000035 (538 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pfl01_0104
Search term: trpA

Human Homologs

References

No references are associated with this feature.