Pseudomonas fluorescens Pf0-1, Pfl01_0116

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest
Locus Tag
Pfl01_0116
Name
Replicon chromosome
Genomic location 117350 - 118249 (- strand)

Cross-References

RefSeq YP_345849.1
GI 77456344
Entrez 3717834
INSDC ABA71860.1
NCBI Locus Tag Pfl01_0116
UniParc UPI00003C7B62
UniProtKB Acc Q3KK46
UniProtKB ID Q3KK46_PSEPF
UniRef100 UniRef100_Q3KK46
UniRef50 UniRef50_Q4KKG5
UniRef90 UniRef90_Q3KK46

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 0.63
Kyte-Doolittle Hydrophobicity Value -0.235
Molecular Weight (kDa) 33865.4
Isoelectric Point (pI) 7.22

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000439 (1015 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pfl01_0116

Human Homologs

References

No references are associated with this feature.