Pseudomonas fluorescens Pf0-1, Pfl01_0117

Gene Feature Overview

Strain	Pseudomonas fluorescens Pf0-1 GCF_000012445.1|latest
Locus Tag	Pfl01_0117
Name
Replicon	chromosome
Genomic location	118408 - 119589 (+ strand)

Cross-References

RefSeq	YP_345850.1
GI	77456345
Entrez	3717835
INSDC	ABA71861.1
NCBI Locus Tag	Pfl01_0117
UniParc	UPI00003C7B61
UniProtKB Acc	Q3KK45
UniProtKB ID	Q3KK45_PSEPF
UniRef100	UniRef100_A0A0C2A426
UniRef50	UniRef50_Q92947
UniRef90	UniRef90_Q4KKG4

Product

Feature Type	CDS
Coding Frame	1
Product Name	acyl-CoA dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7)	-3.46
Kyte-Doolittle Hydrophobicity Value	-0.168
Molecular Weight (kDa)	43.1
Isoelectric Point (pI)	6.19

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000438 (528 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: Pfl01_0117 Search term: acyl-CoA dehydrogenase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000222214 glutaryl-CoA dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4189] E-value: 1.5e-144 Percent Identity: 65.0
Ensembl 110, assembly GRCh38.p14	ENSP00000466845 glutaryl-CoA dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4189] E-value: 1.5e-144 Percent Identity: 65.0

References