Pseudomonas fluorescens Pf0-1, Pfl01_0118

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest
Locus Tag
Pfl01_0118
Name
Replicon chromosome
Genomic location 119603 - 120823 (+ strand)

Cross-References

RefSeq YP_345851.1
GI 77456346
Entrez 3717836
INSDC ABA71862.1
NCBI Locus Tag Pfl01_0118
UniParc UPI00003C7B60
UniProtKB Acc Q3KK44
UniProtKB ID Q3KK44_PSEPF
UniRef100 UniRef100_Q3KK44
UniRef50 UniRef50_Q0K3D9
UniRef90 UniRef90_A0A0B7D2I0

Product

Feature Type CDS
Coding Frame 1
Product Name
L-carnitine dehydratase/bile acid-inducible protein F
Synonyms
Evidence for Translation
Charge (pH 7) -6.16
Kyte-Doolittle Hydrophobicity Value -0.053
Molecular Weight (kDa) 43412.2
Isoelectric Point (pI) 5.64

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000437 (532 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pfl01_0118

Human Homologs

Ensembl 110, assembly GRCh38.p14
succinyl-CoA:glutarate-CoA transferase [Source:HGNC Symbol;Acc:HGNC:16001]
E-value: 2.4e-97
Percent Identity: 45.2

References

No references are associated with this feature.