Pseudomonas fluorescens Pf0-1, Pfl01_1776

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest
Locus Tag
Pfl01_1776
Name
Replicon chromosome
Genomic location 1974118 - 1974708 (+ strand)

Cross-References

RefSeq YP_347508.1
GI 77458003
Entrez 3716574
INSDC ABA73519.1
NCBI Locus Tag Pfl01_1776
UniParc UPI00005C7A5B
UniProtKB Acc Q3KFD7
UniProtKB ID Q3KFD7_PSEPF
UniRef100 UniRef100_A0A0C1ZTM8
UniRef50 UniRef50_A4VL64
UniRef90 UniRef90_I2BLX6

Product

Feature Type CDS
Coding Frame 1
Product Name
RNA polymerase sigma factor SigX
Synonyms
Evidence for Translation
Charge (pH 7) 1.63
Kyte-Doolittle Hydrophobicity Value -0.654
Molecular Weight (kDa) 23.3
Isoelectric Point (pI) 8.04

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003619 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pfl01_1776

Human Homologs

References

No references are associated with this feature.