Pseudomonas fluorescens Pf0-1, Pfl01_2658
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest |
| Locus Tag |
Pfl01_2658
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 3048437 - 3051628 (- strand) |
Cross-References
| RefSeq | YP_348389.1 |
| GI | 77458883 |
| Entrez | 3714314 |
| INSDC | ABA74399.1 |
| NCBI Locus Tag | Pfl01_2658 |
| UniParc | UPI00003873C6 |
| UniProtKB Acc | Q3KCV6 |
| UniProtKB ID | Q3KCV6_PSEPF |
| UniRef100 | UniRef100_Q3KCV6 |
| UniRef50 | UniRef50_Q880Q4 |
| UniRef90 | UniRef90_Q880Q4 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
hydrophobe/amphiphile efflux-1 protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -9.67 |
| Kyte-Doolittle Hydrophobicity Value | 0.294 |
| Molecular Weight (kDa) | 115435.6 |
| Isoelectric Point (pI) | 5.52 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AMR gene predictions from CARD database
Identified using the Resistance Gene Identifier (RGI)
| Model Name | Definition | Accession | Model Type (?) | SNP | Cutoff | Bit Score | Percent Identity | CARD Version |
| adeF | AdeF is the membrane fusion protein of the multidrug efflux complex AdeFGH. [PMID:20696879] | ARO:3000777 | protein homolog model | Strict | 1349.0 | 66.86 | 3.2.4 |
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000417 (2150 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: Pfl01_2658
Search term: hydrophobe/amphiphile efflux-1 protein
|
Human Homologs
References
No references are associated with this feature.