Pseudomonas fluorescens Pf0-1, Pfl01_2658

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest
Locus Tag
Pfl01_2658
Name
Replicon chromosome
Genomic location 3048437 - 3051628 (- strand)

Cross-References

RefSeq YP_348389.1
GI 77458883
Entrez 3714314
INSDC ABA74399.1
NCBI Locus Tag Pfl01_2658
UniParc UPI00003873C6
UniProtKB Acc Q3KCV6
UniProtKB ID Q3KCV6_PSEPF
UniRef100 UniRef100_Q3KCV6
UniRef50 UniRef50_Q880Q4
UniRef90 UniRef90_Q880Q4

Product

Feature Type CDS
Coding Frame 1
Product Name
hydrophobe/amphiphile efflux-1 protein
Synonyms
Evidence for Translation
Charge (pH 7) -9.67
Kyte-Doolittle Hydrophobicity Value 0.294
Molecular Weight (kDa) 115435.6
Isoelectric Point (pI) 5.52

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AMR gene predictions from CARD database

Identified using the Resistance Gene Identifier (RGI)

Model Name Definition Accession Model Type (?) SNP Cutoff Bit Score Percent Identity CARD Version
adeF AdeF is the membrane fusion protein of the multidrug efflux complex AdeFGH. [PMID:20696879] ARO:3000777 protein homolog model Strict 1349.0 66.86 3.2.5

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000417 (2093 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pfl01_2658

Human Homologs

References

No references are associated with this feature.