Pseudomonas fluorescens Pf0-1, Pfl01_3582

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest
Locus Tag
Pfl01_3582
Name
Replicon chromosome
Genomic location 4047794 - 4049074 (- strand)

Cross-References

RefSeq YP_349311.1
GI 77459804
EC Number 6.1.1.11
Entrez 3714567
INSDC ABA75320.1
NCBI Locus Tag Pfl01_3582
UniParc UPI00003C74A2
UniProtKB Acc Q3KA84
UniProtKB ID SYS_PSEPF
UniRef100 UniRef100_Q3KA84
UniRef50 UniRef50_Q8RH11
UniRef90 UniRef90_Q3KA84

Product

Feature Type CDS
Coding Frame 1
Product Name
seryl-tRNA synthetase
Synonyms
Evidence for Translation
Charge (pH 7) -12.17
Kyte-Doolittle Hydrophobicity Value -0.257
Molecular Weight (kDa) 46988.0
Isoelectric Point (pI) 4.98

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002939 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pfl01_3582

Human Homologs

Ensembl 110, assembly GRCh38.p14
seryl-tRNA synthetase 1 [Source:HGNC Symbol;Acc:HGNC:10537]
E-value: 7.0e-55
Percent Identity: 36.3

References

No references are associated with this feature.