Pseudomonas fluorescens Pf0-1, Pfl01_3781

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest
Locus Tag
Pfl01_3781
Name
Replicon chromosome
Genomic location 4277276 - 4278268 (- strand)

Cross-References

RefSeq YP_349510.1
GI 77460003
Entrez 3714713
INSDC ABA75519.1
NCBI Locus Tag Pfl01_3781
UniParc UPI00005C7BFF
UniProtKB Acc Q3K9N5
UniProtKB ID Q3K9N5_PSEPF
UniRef100 UniRef100_Q3K9N5
UniRef50 UniRef50_K9NI24
UniRef90 UniRef90_Q3K9N5

Product

Feature Type CDS
Coding Frame 1
Product Name
diaminopimelate epimerase-like
Synonyms
Evidence for Translation
Charge (pH 7) -3.47
Kyte-Doolittle Hydrophobicity Value -0.088
Molecular Weight (kDa) 34804.1
Isoelectric Point (pI) 6.16

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG020694 (85 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pfl01_3781

Human Homologs

References

No references are associated with this feature.