Pseudomonas fluorescens Pf0-1, Pfl01_3793

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest
Locus Tag
Pfl01_3793
Name
Replicon chromosome
Genomic location 4294488 - 4295609 (+ strand)

Cross-References

RefSeq YP_349522.1
GI 77460015
Entrez 3714763
INSDC ABA75531.1
NCBI Locus Tag Pfl01_3793
UniParc UPI000038760B
UniProtKB Acc Q3K9M3
UniProtKB ID Q3K9M3_PSEPF
UniRef100 UniRef100_Q3K9M3
UniRef50 UniRef50_K9NGS8
UniRef90 UniRef90_Q3K9M3

Product

Feature Type CDS
Coding Frame 1
Product Name
secretion protein HlyD
Synonyms
Evidence for Translation
Charge (pH 7) -1.27
Kyte-Doolittle Hydrophobicity Value -0.134
Molecular Weight (kDa) 39587.4
Isoelectric Point (pI) 6.32

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG023088 (39 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pfl01_3793

Human Homologs

References

No references are associated with this feature.