Pseudomonas fluorescens Pf0-1, Pfl01_3796

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest
Locus Tag
Pfl01_3796
Name
Replicon chromosome
Genomic location 4297800 - 4298390 (+ strand)

Cross-References

RefSeq YP_349525.1
GI 77460018
Entrez 3714766
INSDC ABA75534.1
NCBI Locus Tag Pfl01_3796
UniParc UPI0000387608
UniProtKB Acc Q3K9M0
UniProtKB ID Q3K9M0_PSEPF
UniRef100 UniRef100_Q3K9M0
UniRef50 UniRef50_G8PZ98
UniRef90 UniRef90_Q3K9M0

Product

Feature Type CDS
Coding Frame 1
Product Name
sigma-24 (FecI)
Synonyms
Evidence for Translation
Charge (pH 7) 3.34
Kyte-Doolittle Hydrophobicity Value -0.074
Molecular Weight (kDa) 22374.6
Isoelectric Point (pI) 8.49

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG019695 (37 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pfl01_3796
Search term: sigma-24 (FecI)

Human Homologs

References

No references are associated with this feature.