Pseudomonas fluorescens Pf0-1, Pfl01_4020

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest
Locus Tag
Pfl01_4020
Name
Replicon chromosome
Genomic location 4544241 - 4545662 (- strand)

Cross-References

RefSeq YP_349748.1
GI 77460241
Entrez 3713929
INSDC ABA75757.1
NCBI Locus Tag Pfl01_4020
UniParc UPI00003C771C
UniProtKB Acc Q3K8Z7
UniProtKB ID Q3K8Z7_PSEPF
UniRef100 UniRef100_Q3K8Z7
UniRef50 UniRef50_A0A083UQ09
UniRef90 UniRef90_A0A0B7DFN6

Product

Feature Type CDS
Coding Frame 1
Product Name
lytic transglycosylase catalytic subunit
Synonyms
Evidence for Translation
Charge (pH 7) 19.67
Kyte-Doolittle Hydrophobicity Value -0.278
Molecular Weight (kDa) 52776.6
Isoelectric Point (pI) 10.41

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002704 (530 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pfl01_4020

Human Homologs

References

No references are associated with this feature.