Pseudomonas fluorescens Pf0-1, Pfl01_4021

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest
Locus Tag
Pfl01_4021
Name
Replicon chromosome
Genomic location 4545899 - 4546705 (+ strand)

Cross-References

RefSeq YP_349749.1
GI 77460242
Entrez 3713930
NCBI Locus Tag Pfl01_4021

Product

Feature Type CDS
Coding Frame 1
Product Name
Sec-independent protein translocase TatD
Synonyms
Evidence for Translation
Charge (pH 7) -6.53
Kyte-Doolittle Hydrophobicity Value -0.249
Molecular Weight (kDa) 29878.7
Isoelectric Point (pI) 5.95

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002703 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pfl01_4021

Human Homologs

Ensembl 110, assembly GRCh38.p14
TatD DNase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24220]
E-value: 2.4e-32
Percent Identity: 34.0
Ensembl 110, assembly GRCh38.p14
TatD DNase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24220]
E-value: 2.4e-32
Percent Identity: 34.0

References

No references are associated with this feature.