Pseudomonas fluorescens Pf0-1, Pfl01_5681

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest
Locus Tag
Pfl01_5681
Name
Replicon chromosome
Genomic location 6366179 - 6367090 (+ strand)

Cross-References

RefSeq YP_351408.1
GI 77461901
Entrez 3713673
NCBI Locus Tag Pfl01_5681

Product

Feature Type CDS
Coding Frame 1
Product Name
NAD-dependent epimerase/dehydratase
Synonyms
Evidence for Translation
Charge (pH 7) -0.89
Kyte-Doolittle Hydrophobicity Value -0.237
Molecular Weight (kDa) 33606.9
Isoelectric Point (pI) 6.68

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005000 (390 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pfl01_5681

Human Homologs

Ensembl 97, assembly GRCh38.p12
GDP-mannose 4,6-dehydratase [Source:HGNC Symbol;Acc:HGNC:4369]
E-value: 5.1e-16
Percent Identity: 28.2
Ensembl 97, assembly GRCh38.p12
GDP-mannose 4,6-dehydratase [Source:HGNC Symbol;Acc:HGNC:4369]
E-value: 5.1e-16
Percent Identity: 28.2

References

No references are associated with this feature.