Pseudomonas fluorescens Pf0-1, Pfl01_5682

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest
Locus Tag
Pfl01_5682
Name
Replicon chromosome
Genomic location 6367087 - 6368058 (+ strand)

Cross-References

RefSeq YP_351409.1
GI 77461902
Entrez 3713674
INSDC ABA77418.1
NCBI Locus Tag Pfl01_5682
UniParc UPI00005C7D21
UniProtKB Acc Q3K486
UniProtKB ID Q3K486_PSEPF
UniRef100 UniRef100_Q3K486
UniRef50 UniRef50_Q51366
UniRef90 UniRef90_Q3K486

Product

Feature Type CDS
Coding Frame 1
Product Name
GDP-mannose 4,6-dehydratase
Synonyms
Evidence for Translation
Charge (pH 7) -1.38
Kyte-Doolittle Hydrophobicity Value -0.251
Molecular Weight (kDa) 36.2
Isoelectric Point (pI) 6.64

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004999 (389 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pfl01_5682

Human Homologs

Ensembl 107, assembly GRCh38.p13
GDP-mannose 4,6-dehydratase [Source:HGNC Symbol;Acc:HGNC:4369]
E-value: 1.7e-85
Percent Identity: 47.2

References

No references are associated with this feature.