Pseudomonas fluorescens F113, PSF113_0004 (gyrB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_0004
Name
gyrB
Replicon chromosome
Genomic location 4407 - 6785 (+ strand)

Cross-References

RefSeq YP_005205433.1
GI 378947945
EC Number 5.99.1.3
Entrez 11833440
INSDC AEV60038.1
NCBI Locus Tag PSF113_0004
UniParc UPI00023B3A41
UniProtKB Acc G8PW46
UniProtKB ID G8PW46_PSEFL
UniRef100 UniRef100_G8PW46
UniRef50 UniRef50_P13364
UniRef90 UniRef90_Q4KKS7

Product

Feature Type CDS
Coding Frame 1
Product Name
protein GyrB
Synonyms
Evidence for Translation
Charge (pH 7) -15.24
Kyte-Doolittle Hydrophobicity Value -0.378
Molecular Weight (kDa) 88739.9
Isoelectric Point (pI) 5.67

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 633 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000004 (553 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_0004
Search term: gyrB
Search term: protein GyrB

Human Homologs

Ensembl 97, assembly GRCh38.p12
DNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]
E-value: 3.9e-31
Percent Identity: 24.7

References

No references are associated with this feature.