Pseudomonas fluorescens F113, PSF113_0090 (coxB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_0090
Name
coxB
Replicon chromosome
Genomic location 101148 - 102239 (- strand)

Cross-References

RefSeq YP_005205523.1
GI 378948035
EC Number 1.9.3.1
EC Number 2.1.1.64
Entrez 11828167
NCBI Locus Tag PSF113_0090

Product

Feature Type CDS
Coding Frame 1
Product Name
CoxB protein
Synonyms
Evidence for Translation
Charge (pH 7) -2.02
Kyte-Doolittle Hydrophobicity Value -0.074
Molecular Weight (kDa) 40741.8
Isoelectric Point (pI) 6.70

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 406 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000103 (511 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_0090
Search term: coxB
Search term: CoxB protein

Human Homologs

Ensembl 97, assembly GRCh38.p12
mitochondrially encoded cytochrome c oxidase II [Source:HGNC Symbol;Acc:HGNC:7421]
E-value: 9.8e-22
Percent Identity: 50.6

References

No references are associated with this feature.