Pseudomonas fluorescens F113, PSF113_0151 (gcdH)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_0151
Name
gcdH
Replicon chromosome
Genomic location 162866 - 164047 (+ strand)

Cross-References

RefSeq YP_005205584.1
GI 378948096
EC Number 1.3.99.7
Entrez 11828228
INSDC AEV60189.1
NCBI Locus Tag PSF113_0151
UniParc UPI00023B3B38
UniProtKB Acc G8PY94
UniProtKB ID G8PY94_PSEFL
UniRef100 UniRef100_G8PY94
UniRef50 UniRef50_Q92947
UniRef90 UniRef90_Q4KKG4

Product

Feature Type CDS
Coding Frame 1
Product Name
protein GcdH
Synonyms
Evidence for Translation
Charge (pH 7) -2.46
Kyte-Doolittle Hydrophobicity Value -0.187
Molecular Weight (kDa) 43.2
Isoelectric Point (pI) 6.41

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 468 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000438 (545 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_0151
Search term: gcdH
Search term: protein GcdH

Human Homologs

Ensembl 97, assembly GRCh38.p12
glutaryl-CoA dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4189]
E-value: 6.9e-146
Percent Identity: 64.9
Ensembl 97, assembly GRCh38.p12
glutaryl-CoA dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4189]
E-value: 6.9e-146
Percent Identity: 64.9

References

No references are associated with this feature.