Pseudomonas fluorescens F113, PSF113_0152

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_0152
Name
Replicon chromosome
Genomic location 164061 - 165281 (+ strand)

Cross-References

RefSeq YP_005205585.1
GI 378948097
EC Number 2.8.3.16
Entrez 11828229
INSDC AEV60190.1
NCBI Locus Tag PSF113_0152
UniParc UPI00023B3B39
UniProtKB Acc G8PY95
UniProtKB ID G8PY95_PSEFL
UniRef100 UniRef100_G8PY95
UniRef50 UniRef50_Q0K3D9
UniRef90 UniRef90_A0A0B7D2I0

Product

Feature Type CDS
Coding Frame 1
Product Name
L-carnitine dehydratase/bile acid-inducible protein F
Synonyms
Evidence for Translation
Charge (pH 7) -4.16
Kyte-Doolittle Hydrophobicity Value -0.064
Molecular Weight (kDa) 43503.2
Isoelectric Point (pI) 6.11

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 312 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000437 (549 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_0152

Human Homologs

Ensembl 97, assembly GRCh38.p12
succinyl-CoA:glutarate-CoA transferase [Source:HGNC Symbol;Acc:HGNC:16001]
E-value: 2.9e-99
Percent Identity: 45.7

References

No references are associated with this feature.