Pseudomonas fluorescens F113, PSF113_0676

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_0676
Name
Replicon chromosome
Genomic location 811985 - 813262 (+ strand)

Cross-References

RefSeq YP_005206107.1
GI 378948619
EC Number 2.3.1.16
EC Number 2.3.1.85
EC Number 2.3.1.9
Entrez 11828762
INSDC AEV60712.1
NCBI Locus Tag PSF113_0676
UniParc UPI00023B3B4E
UniProtKB Acc G8Q628
UniProtKB ID G8Q628_PSEFL
UniRef100 UniRef100_G8Q628
UniRef50 UniRef50_O86361
UniRef90 UniRef90_G8Q628

Product

Feature Type CDS
Coding Frame 1
Product Name
3-ketoacyl-CoA thiolase, Acetyl-CoA acetyltransferase
Synonyms
Evidence for Translation
Charge (pH 7) 1.75
Kyte-Doolittle Hydrophobicity Value -0.082
Molecular Weight (kDa) 45.5
Isoelectric Point (pI) 7.53

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 461 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004423 (511 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_0676

Human Homologs

Ensembl 97, assembly GRCh38.p12
hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta [Source:HGNC Symbol;Acc:HGNC:4803]
E-value: 1.7e-65
Percent Identity: 36.2
Ensembl 97, assembly GRCh38.p12
hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta [Source:HGNC Symbol;Acc:HGNC:4803]
E-value: 1.7e-65
Percent Identity: 36.2

References

No references are associated with this feature.